Capturing carbon dioxide and converting it into chemicals using bacteria in “spacesuits”

The hybrid system takes advantage of efficient light capture by semiconductors to feed electrons to anaerobic bacteria, which normally scavenge electrons from their environment to live. The goal is to boost carbon capture by the bacteria to churn out useful carbon compounds.

“We are interfacing these bugs with a semiconductor that overwhelms them with electrons, so they can do more chemistry,” Yang said. “But at the same time this process also generates all these reactive oxygen species, which are detrimental to the bugs. We are putting these bacteria in a shell so that if any of these oxidative species comes in, this first defense, the shell, decomposes them.”

The suit is made of a MOF mesh that wraps around the bacteria, covering it in patches. Wearing these MOF suits, the bacteria live five times longer at normal oxygen concentrations – 21 percent by volume – than without the suits, and often longer than in their natural environment, Yang said. Their normal lifespan ranges from weeks to months, after which they can be flushed from the system and replaced with a fresh batch.

In this experiment, the researchers used bacteria called Morella thermoacetica, which produce acetate (acetic acid, or vinegar), a common precursor in the chemical industry. Another one of their test bacteria, Sporomusa ovata, also produces acetate.

“We picked these anaerobic bacteria because their selectivity toward one chemical product is always 100 percent,” he said. “In our case, we picked a bug that gives us acetate. But you could select another bug to give you methane or alcohol.”

In fact, the bacteria that ferment the alcohol in beer and wine and turn milk into cheese and yoghurt are all anaerobic.

While Yang’s first experiments with the hybrid system paired bacteria with a bristle of silicon nanowires, in 2016 he discovered that feeding the bacteria cadmium encouraged them to decorate themselves with a natural semiconductor, cadmium sulfide, that acts as an efficient light absorber feeding the bacteria electrons.

In the current experiment, the researchers took bacteria decorated with cadmium sulfide and enshrouded them with a flexible, one nanometer thick layer of MOF. While a rigid MOF interfered with the bacteria’s normal process of growth and splitting, a zirconium-based MOF patch turned out to be soft enough to allow the bacteria to swell and divide while still clothed with MOF, after which new MOF in the solution re-clothed them.

“You can think of the 2D MOF like a sheet of graphene: a one-layer-thick cloak that covers the bacteria,” said co-author Omar Yaghi, a pioneer of MOFs and the James and Neeltje Tretter Chair in the Department of Chemistry. “The 2D MOF is floating in solution with the bacteria, and as the bacteria replicate they are covered further with the 2D MOF layer, so it protects the bacteria from oxygen.”

Yang and his colleagues are also working to improve the hybrid system’s efficiency of light capture, electron transfer and production of specific compounds. They envision combining these optimized capabilities with new metabolic pathways in these bacteria to produce ever more complex molecules.

“Once you fix or activate CO₂ – and that is the most difficult part – you can use many existing chemical and biological approaches to upgrade them to fuels, pharmaceuticals and commodity chemicals,” he said.

Learn more: ‘Spacesuits’ protect microbes destined to live in space